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Hace 1 día · The Wilcox test was used to identify differentially expressed genes (DEGs) according to the criteria of |log 2 (fold change) |> 1 and false discovery rate (FDR) < 0.05. ... The volcano plot ...
Hace 5 días · Volcano plots, heatmaps, and GSEA of differentially expressed genes within macrophages demonstrate that COVID-19 lung macrophages exhibit alternatively activated, wound-healing, immune-suppressive gene expression signatures characterized by increased expression of CD163, ...
Hace 19 horas · We screened out differentially expressed genes (DEGs) based on “limma” package with the standard of |log fold change (FC)| ≥ 1.5 and false discovery rate (FDR) < 0.05. ... The results of upregulated or downregulated DEGs were visualized in volcano plots and heat maps constructed by “ggplot2” R package (https://bioconductor.org ...
Hace 19 horas · Differentially expressed circRNAs (DE-circRNAs) between each pair of groups were visually represented using scatter plots, volcano plots and hierarchical clustering. CircRNAs with p-values<0.05 and fold changes≥1.5 were considered significantly differentially expressed. Similarly, the expression profiles of differentially expressed genes ...
Hace 3 días · We obtained 919 genes that matched the threshold as differentially expressed genes (DEGs) by comparing gene expression profiles of the peripheral blood from patients with SS with those from normal healthy controls ... Volcano plots display the DEMs in SS-ILD vs Nor and SP vs SS-ILD comparisons based on P < 0.05 and fold change >2.0. (C, D ...
Hace 19 horas · Transcriptional profiling reveals the key pathways influenced by the P2X7 receptor in OP. A Volcano plot of differential expression analysis based on transcriptome sequencing; B heatmap of selected differentially expressed genes; C Venn diagram showing the intersection of genes related to “OP” from the transcriptome sequencing and GeneCards database; D scatter plot of GO and KEGG ...
Hace 5 días · A Volcano plot shows differential CTCF ChIP-seq peaks. KO/WT, N = 3, FDR < 0.05, |Log 2 FoldChange| ≥ 0.585. Red, Up. ... List of differentially-expressed genes associated with B2_new_loop. 13059_2024_3327_MOESM2_ESM.pdf. Additional file 2: Fig. S1. Increased chromatin accessibility on SINE_B2 elements after Setdb1 ablation in mouse neural ...
